Services

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SciLifeLab Protocols
SciLifeLab Protocols
Used for the creation, sharing, and versioning of laboratory and computational protocols. Enables collaboration, author attribution, and reproducibility.
Precision Medicine Portal
Precision Medicine Portal
Links to multiple data sources, including quality registers and KIARVA (an open-source immunology database).
GeneSPIDER version: v2
GeneSPIDER version: v2
GeneSPIDER(v2) is a Matlab toolbox for gene regulatory network inference and benchmarking with controlled network and data properties.

Guidance

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Data sources
Data sources
Information about where to submit/access different types of data.
Onboarding for fellows
Onboarding for fellows
Find out more about how to access services offered by SciLifeLab Data Centre. Aimed in particular at SciLifeLab and DDLS fellows.
Compute resources in Sweden
Compute resources in Sweden
Information about the compute resources (primarily for hosting and analysis) available in Sweden, as well as how to apply.

Data Highlights

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FunCoup 6: Large-scale functional association networks with regulatory links and integrated tools
October 16, 2025
FunCoup 6: Large-scale functional association networks with regulatory links and integrated tools
Large-scale Gene Regulatory Network (GRN) simulation and benchmarking using perturbation-aware single-cell data
September 18, 2025
Large-scale Gene Regulatory Network (GRN) simulation and benchmarking using perturbation-aware single-cell data
New tool allows users to navigate both full-length protein and domain orthologs.
November 7, 2024
New tool allows users to navigate both full-length protein and domain orthologs.

What's new?

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SciLifeLab Data Centre looks forward to engaging, supporting, and collaborating with you and your research group.

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Recently published items in the SciLifeLab Data Repository

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If you would like further information about SciLifeLab data repository or experience issues with the items above, please email figshare@scilifelab.se. If you have questions about a specific item, contact information is available on the item's page.

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Recent apps and models published on SciLifeLab Serve

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If you would like further information about SciLifeLab Serve or experience issues with the apps above, please email serve@scilifelab.se. To find out more about a given app/model, click on the corresponding 'Details' button on the apps and models page on SciLifeLab Serve.

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